BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017H07LP1|AL427220
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig799 1440 0.0
>3x_Contig799
Length = 3669
Score = 1440 bits (720), Expect = 0.0
Identities = 763/780 (97%), Gaps = 3/780 (0%)
Strand = Plus / Plus
Query: 107 ttaacgcaacccagacagcaccgagtttcatttcgttaaacaatgcaactwacttgcgtg 166
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5 ttaacgcaacccagacagcaccgagtttcatttcgttaaacaatgcaactaacttgcgtg 64
Query: 167 aactttcggtatctccttccttttgatgagaatagatatwatcaacagcagttacaacct 226
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 aactttcggtatctccttccttttgatgagaatagatataatcaacagcagttacaacct 124
Query: 227 ttaataacttggactgctcagagctgggagcagtgaatttttgawtgatttctgagttga 286
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 125 ttaataacttggactgctcagagctgggagcagtgaatttttgaatgatttctgagttga 184
Query: 287 tttctgttccgctcttcacattaggcaattgcdaacacaattcattcaaatctgctatca 346
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 185 tttctgttccgctcttcacattaggcaattgcaaacacaattcattcaaatctgctatca 244
Query: 347 actgggaaatcgtagacattgccaacgttctcaactccgaagtgaagatctcctgagtat 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 actgggaaatcgtagacattgccaacgttctcaactccgaagtgaagatctcctgagtat 304
Query: 407 cctttatggagawwaggttggtcattaggttcaaggtctgcttgawaattttcgtwttgc 466
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 305 cctttatggagaaaaggttggtcattaggttcaaggtctgcttgaaaattttcgtattgc 364
Query: 467 wcgaatccaatttgatcactgatacgattagttccaaatgcttcttctcaatcacaggaa 526
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 365 acgaatccaatttgatcactgaaacgattagttccaaatgcttcttctcaatcacaggaa 424
Query: 527 tctcaaaatttcttttggagttgcttgcattcttcttttttaccaacgacgtaataggtt 586
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 425 tctcaaaatttcttttggagttgcttgcattcttctttttaaccaacgacgtaataggtt 484
Query: 587 tgggacatgactccaaaatatccgttaacagatccattaakacagtctcgtcagtcacca 646
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 485 tggaacatgactccaaaatatccgttaacagatccattaaaacagtctcgtcagtcacca 544
Query: 647 atttctggttaaataaggagaacaaagcgttgattggccacttcatgtttttcgaaaaaa 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atttctggttaaataaggagaacaaagcgttgattggccacttcatgtttttcgaaaaaa 604
Query: 707 tgtcctttttggtcttgacgtatggtttgttaatgatgaggttatcatgttctgtgacga 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgtcctttttggtcttgacgtatggtttgttaatgatgaggttatcatgttctgtgacga 664
Query: 767 aaaagtatctcaatcgagcatcagaatcaatcataaactggagtacctcaatacattgat 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aaaagtatctcaatcgagcatcagaatcaatcataaactggagtacctcaatacattgat 724
Query: 827 tcgcaacaatgagtggggtgc-atctggtggt-amtggtatac-atatttttgtgatcgg 883
||||||||||||||||||||| |||||||||| | |||||||| ||||||||||||||||
Sbjct: 725 tcgcaacaatgagtggggtgcaatctggtggtaactggtatacaatatttttgtgatcgg 784
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6013
Number of Sequences: 1807
Number of extensions: 6013
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)